PathoBacTyper: A Web Server for Pathogenic Bacteria Identification and Molecular Genotyping
نویسندگان
چکیده
منابع مشابه
PathoBacTyper: A Web Server for Pathogenic Bacteria Identification and Molecular Genotyping
With the decline in the cost of whole-genome sequencing because of the introduction of next-generation sequencing (NGS) techniques, many public health and clinical laboratories have started to use bacterial whole genomes for epidemiological surveillance and clinical investigation. For epidemiological and clinical purposes in this "NGS era," whole-genome-scale single nucleotide polymorphism (wgS...
متن کاملIsolation and molecular identification of carotenoid-producing bacteria
The production of pigments from bacteria is significant due to the low cost, high yield and ease of extract compared with other sources. Carotenoids are one of the most important pigments with antioxidant properties which are the precursor of vitamin A synthesis and have antibody overproduction ability, anti-tumor activity and inhibitory effect on the cardiovascular disease. The present study a...
متن کاملA density based clustering approach to distinguish between web robot and human requests to a web server
Today world's dependence on the Internet and the emerging of Web 2.0 applications is significantly increasing the requirement of web robots crawling the sites to support services and technologies. Regardless of the advantages of robots, they may occupy the bandwidth and reduce the performance of web servers. Despite a variety of researches, there is no accurate method for classifying huge data ...
متن کاملSeqTU: A Web Server for Identification of Bacterial Transcription Units
A transcription unit (TU) consists of K ≥ 1consecutive genes on the same strand of a bacterial genome that are transcribed into a single mRNA molecule under certain conditions. Their identification is an essential step in elucidation of transcriptional regulatory networks. We have recently developed a machine-learning method to accurately identify TUs from RNA-seq data, based on two features of...
متن کاملMolecular identification of pathogenic fungi.
Systemic fungal infections represent a major cause of morbidity and mortality in immunocompromised patients. The ever-increasing number of yeast species associated with human infections that are not covered by conventional identification kits, and the fact that moulds isolated from deep infections are frequently impossible to identify using classical methods due to lack of sporulation, has driv...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Frontiers in Microbiology
سال: 2017
ISSN: 1664-302X
DOI: 10.3389/fmicb.2017.01474